Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61369g00001 ATGAAAGCAGGGAAATTGAACCATGATGAAGATGAGTATGATGATGACGATTTCAATTCTTCCAAAAAACAAGGCACTTCTTCTGCCCCTAACACCAATAAAGATGGAAAAGCTACTGATAAGGCTAGTGTAATAAGATCGAAACATTCTGTAACCGAGCAGCGAAGAAGAAGCAAGATAAATGAGAGCACAGACACAGACATGAACACCAGACACGACACGGTGTCCGACACGGGACACGCCTTGTAA 249 0.4257 MKAGKLNHDEDEYDDDDFNSSKKQGTSSAPNTNKDGKATDKASVIRSKHSVTEQRRRSKINESTDTDMNTRHDTVSDTGHAL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61369g00001 82 MobiDBLite consensus disorder prediction 1 82 - -
Trme61369g00001 82 MobiDBLite consensus disorder prediction 22 38 - -
Trme61369g00001 82 Coils Coil 82 82 - -
Trme61369g00001 82 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 8 62 IPR044295 GO:0003700|GO:0006351|GO:0046983
Trme61369g00001 82 MobiDBLite consensus disorder prediction 39 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61369g00001 Trme-Chr61369 193 750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61369g00001 1 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 60.938 1.94e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61369g00001 - - gmx:100795416 96.6709