Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61329g00001 CTTCTAATGGTGGCCAATGCTGGTGACTGTCGAGCAGTTCTCAGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACCGACCTATTTATCCATCAGAACGGAGGCGAGTTGAAGAATTGGGTGGTTACGTAGAGGATGGTTATCTTAATGGNGTTTTATCAGTTACAAGAGCACTAGGGGACTGGGACATGAAGTTACCTAGGGGTGCTCCCTCGCCTTTGATTGCAGAGCCTGAGTTTCGCCAAATGGTTCTAACAGAGGACGACGAATTCCTCATCATTGGATGTGATGGCATCTGGGATGTGATGACAAGTCAGCATGCCGTTAGCCTTGTTCGTAAAGGTTTGAGGAGGCATGATGACCCAGAGAAGTGCGCCAGGGACCTAGTTATGGAGGCATTGCGCCTCAACACATTCGACAATCTGACAGTGATCATTGTCTGTCTCTCTTCACTTGACCAAGGGGAGTCAGAGTCATCACCACCTCCCCAGAGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGAAACTTGTTGGAAGGAAGTGCTAGCAACTGA 576 0.4861 LLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGAPSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCLSSLDQGESESSPPPQRKLRCCSLSAEALCSLRNLLEGSASN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61329g00001 191 Gene3D - 1 169 IPR036457 -
Trme61329g00001 191 ProSiteProfiles PPM-type phosphatase domain profile. 1 150 IPR001932 -
Trme61329g00001 191 SUPERFAMILY PP2C-like 2 152 IPR036457 -
Trme61329g00001 191 CDD PP2Cc 2 150 IPR001932 -
Trme61329g00001 191 Pfam Protein phosphatase 2C 2 142 IPR001932 -
Trme61329g00001 191 PANTHER PROTEIN PHOSPHATASE 2C 2 148 IPR015655 GO:0004722|GO:0006470
Trme61329g00001 191 SMART PP2C_4 1 148 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61329g00001 Trme-Chr61329 268 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61329g00001 1 187 PP2C-type Phosphatase Gene Family AT3G62260 69.149 2.80e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61329g00001 K14803 - gmx:100785388 360.918