Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61309g00001 ATGCTCCGACCTCAAGTTGGTGGATGGACTCAAGTTTATGGCAATATTCTCTCATTTGCCACTGTCAGAGGAGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGCCCTTTACCTGAAGTTTTCTGA 165 0.4424 MLRPQVGGWTQVYGNILSFATVRGAAHEAPFSQPERSLVLFKSFLEGSPLPEVF 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61309g00001 54 Gene3D - 2 50 - -
Trme61309g00001 54 SUPERFAMILY alpha/beta-Hydrolases 4 51 IPR029058 -
Trme61309g00001 54 Pfam Serine carboxypeptidase 4 47 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61309g00001 Trme-Chr61309 330 750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61309g00001 1 50 Calmodulin-binding Proteins AT2G22960 32.000 5.96e-08 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61309g00001 K16297 - nnu:104591835 100.908