Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61291g00001 ATGGCAGGTACGATGAAGAAAGTCGACAAGATTCGTCAAATCGTGCGTTTGAAACAACTCATGACACGGTGGAAACAAATCAGTCTCCGTCGTCGTTCGTTTCGTTCCGAACCTGAAGAAACAACAACNNNNNNNGAACCATGTGTTACTCCACGAAGACAACCACCTTCAGGTTTTGTTTTCGTTTATGTTGGATCGGAACGACACCGTTTTGCTATCCCTGCTCGGTTTCTTAACTTTCCTGTTTTCGCTGGTCTTCTCGATGTAACCGAGGAAGAGTTTGGTTTACGAGGTAACGGTGGTTTAGTTCTTCCTTGCCACGTGGATTTTTTCACGGAAATCGTTAAACATCTTCATAAGAATGAAAATAAGTATGGGAAACTTTCTTTGGAAGAGTTTGTTAAAATGTTTTCTGACGTGGCGTTTGATTCTTCTTGTAAAGATAAGGAAAACGTCGTCGTTTTGGCTCCTTT 473 0.4123 MAGTMKKVDKIRQIVRLKQLMTRWKQISLRRRSFRSEPEETTTXXEPCVTPRRQPPSGFVFVYVGSERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVDFFTEIVKHLHKNENKYGKLSLEEFVKMFSDVAFDSSCKDKENVVVLAP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61291g00001 157 Pfam Auxin responsive protein 23 117 IPR003676 GO:0009733
Trme61291g00001 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61291g00001 Trme-Chr61291 404 876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61291g00001 7 116 Calmodulin-binding Proteins AT3G43120 32.609 1.46e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61291g00001 K14488 - gmx:100793118 180.644