Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61265g00001 GCAGGACAAGTTATGCTAGATGGTCATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAAATAGGACTAGTGAGCCAAGAACCTGCTTTGTTCGCTACCACGATTCGAGAAAATATACTCTTGGGAAGGCCTGATGCAAACCAAGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGCTATGAAACTCAG 228 0.4167 AGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQ 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61265g00001 76 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 75 IPR027417 -
Trme61265g00001 76 Gene3D - 2 76 IPR027417 -
Trme61265g00001 76 Pfam ABC transporter 2 58 IPR003439 GO:0005524
Trme61265g00001 76 PANTHER ABC TRANSPORTER B FAMILY 1 76 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61265g00001 Trme-Chr61265 649 876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61265g00001 1 76 Calmodulin-binding Proteins AT2G36910 85.526 9.14e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61265g00001 K05658 - qsu:112009694 145.976