Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme612537g00001 ATGGCTGTGGTGGTTCCTAGGAATACTTCTATACCTTACAAGGGGACTTGCTGGTGTGGTACTTCTAAGGATAACCAAGATGAAGCCTTGATTAATGTTTACGAGGGTGAGAGGGCAAGAGCCACCGACAACAATCTGCTTGGTACTTTTATTCTTTCTTGTCTTTTAGGTGTCCCTCGTGGCAACCTCGTGGAG 195 0.4615 MAVVVPRNTSIPYKGTCWCGTSKDNQDEALINVYEGERARATDNNLLGTFILSCLLGVPRGNLVE 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme612537g00001 65 PANTHER HEAT SHOCK PROTEIN 70KDA 1 61 IPR013126 GO:0005524|GO:0140662
Trme612537g00001 65 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 62 IPR029047 -
Trme612537g00001 65 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 65 IPR029047 -
Trme612537g00001 65 Pfam Hsp70 protein 4 62 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme612537g00001 Trme-Chr612537 43 237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme612537g00001 1 61 Calmodulin-binding Proteins AT3G12580 57.377 1.59e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme612537g00001 K03283 - lja:Lj0g3v0151879.1 78.1814