Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61246g00001 GATTCACATCCTAGTCCTGGAAGAACTGTAGACAGGTCACGGATGGAACGGCGTGGGAATGTTGTGGCTGAGGAAGACAGATGGAATAAAGCTGCCAATGCTTTTCATTCTGGGCGTGGTTTGGATGGTATTGGTGGTAATAGCGGTCGGCACGGCCAAGGAAGAAATTTTGGTGTTTTAAGAAATCCAGGTGGACAGGTATCCCCTCAATTTGCTGGGGGTATCCTTTCTGGACCAATGCAATCTGTGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCTGACGGGGAGAGGTGGCAGCGTTCCACTAGCTTCCAGCAGAGGGGTTTAATTCCTTCACCTCAGTCTCCCTTACAGATGATGCACAGGGCCGAGAAAAAGTATGAAGTAGGTAAAGTCTCAGATGCGGAAGAGGCAAAGCAGAGGCAGCTGAAGGCTATCTTGAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGCTCCCATCTGGCTACTGAGTTGCCTGATTTGAGCGTGGACAATGAAAAGATAACTTTCAAAAGAAAGGGAGCTGAGAAGAACCAAGGCAAGAAGGCGCATGTTAGGAAACATAAGATTGATTGGAGAACTATATAA 732 0.459 DSHPSPGRTVDRSRMERRGNVVAEEDRWNKAANAFHSGRGLDGIGGNSGRHGQGRNFGVLRNPGGQVSPQFAGGILSGPMQSVGNQGGMQRNSPDGERWQRSTSFQQRGLIPSPQSPLQMMHRAEKKYEVGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDLSVDNEKITFKRKGAEKNQGKKAHVRKHKIDWRTI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61246g00001 243 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 11 222 IPR045208 GO:0003743
Trme61246g00001 243 MobiDBLite consensus disorder prediction 79 114 - -
Trme61246g00001 243 SUPERFAMILY ARM repeat 135 216 IPR016024 -
Trme61246g00001 243 Pfam MIF4G domain 141 207 IPR003890 GO:0003723|GO:0005515
Trme61246g00001 243 Gene3D - 132 237 - -
Trme61246g00001 243 MobiDBLite consensus disorder prediction 74 116 - -
Trme61246g00001 243 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61246g00001 Trme-Chr61246 2 834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61246g00001 1 220 Eukaryotic Initiation Factors Gene Family AT3G60240 61.333 4.63e-88 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61246g00001 K03260 - gmx:100819084 362.844