Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61221g00001 ATGAAGGCTGCTAAGCAGGATCCTGATCATGCTGAAGCTTTGGAGGGACTAGATACACTTGCAAATCTCGCCATCCTGGGGGAAGGGGAGGCTCTCCAGGCATCTTCCCAGGCCACAACTAAACACCCACGACATAGACCTGGCTGCTCTTGCATTGTTTGCATCCAGCCTCCAAGTGGAAAGGGCCCCAAACATAAGCAGACATGCACATGTAATGTCTGTCTAACGGTGAAACGTCGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAATCAGAAAGAGAAGCAGAGACAACGCGTAAAAAGCTTCAGCAACAGAATTCCCAGCAATTGCCTTCACCCGAAATTTTGCTTGATGATGATTCCTTGCATAATAGTAATACGGGTGATAGTAGCCCAAACATGAACAAGGAGGGTAATGACTGTTCTGATGATGATCCTCACCGGATAAAATCATCCATGTCTCCGTTCAAAGGCCAAATTGACCTCAATATCCAGCCGGAGCGAGAAGAAGAATTATCACCTGGTTCAGATTCTGGTGGTGTGATGAAGCTGCTCCATGATGCTACTGAGATGTATCTCAAGCAGCAACAGCAGCAGCAGAAGACTGTGT 616 0.4724 MKAAKQDPDHAEALEGLDTLANLAILGEGEALQASSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKLQQQNSQQLPSPEILLDDDSLHNSNTGDSSPNMNKEGNDCSDDDPHRIKSSMSPFKGQIDLNIQPEREEELSPGSDSGGVMKLLHDATEMYLKQQQQQQKTV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61221g00001 205 Coils Coil 87 110 - -
Trme61221g00001 205 MobiDBLite consensus disorder prediction 87 102 - -
Trme61221g00001 205 MobiDBLite consensus disorder prediction 86 184 - -
Trme61221g00001 205 MobiDBLite consensus disorder prediction 103 139 - -
Trme61221g00001 205 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61221g00001 Trme-Chr61221 1 616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61221g00001 16 103 B3 DNA Binding Superfamily AT2G30470 64.516 2.32e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61221g00001 K09287 - gmx:100807252 351.673