Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61118g00001 ATGGCTTCTTCTATGTTTCTCAGTCTTATGTTTTTGTTGCCACCAATGTTGCTTGAAGCAAAGGAGTATGATGTTGGAGGCAAAGATGGTTGGGTCCTGAAACCTTCTGATTACTACAGTCACTGGGCTCAAGCAAATAGGTTTCAAATTAATGACACTCTCCATTTCAAGTACAATAAAGGGAATGATTCGGTTCTTGTGGTGAAAAAGGAGGACTATGATTCTTGCAACACCAACAATCCAAAACAAAAGATGGACGATGGGGATTCAAGTTTTAAGCTCAGTGATTCTGGTCTCTATTATTTCATCAGTGGCAATGTTGAAAATTGCAAACATGGTGAAAAGGTTATTGTTTTAGTCATGGCTAGACACAAACACCACCCTCTTCCCACCACTGCACCTGCACCGTCTCAGCCGCCAGCAAGTGCCTTGTCGCCACCTCAGATTCACTCGTCCGCTTTGGATACTCCGGCGCCGTCTCCGTCTAAAGCAAGTTTTGTTGGTGTGAGTGTGGGATTTAGGGTTGTGGTTTGGGTTGTTTTGGTGTTTAGTACTAGCTATGTAGGGTTTGTTTATTAG 579 0.4318 MASSMFLSLMFLLPPMLLEAKEYDVGGKDGWVLKPSDYYSHWAQANRFQINDTLHFKYNKGNDSVLVVKKEDYDSCNTNNPKQKMDDGDSSFKLSDSGLYYFISGNVENCKHGEKVIVLVMARHKHHPLPTTAPAPSQPPASALSPPQIHSSALDTPAPSPSKASFVGVSVGFRVVVWVVLVFSTSYVGFVY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61118g00001 192 CDD OsENODL1_like 21 121 IPR041846 -
Trme61118g00001 192 Pfam Plastocyanin-like domain 32 113 IPR003245 GO:0009055
Trme61118g00001 192 Gene3D - 19 125 IPR008972 -
Trme61118g00001 192 MobiDBLite consensus disorder prediction 144 159 - -
Trme61118g00001 192 ProSiteProfiles Phytocyanin domain profile. 21 122 IPR003245 GO:0009055
Trme61118g00001 192 PANTHER BLUE COPPER PROTEIN 21 137 IPR039391 GO:0009055
Trme61118g00001 192 MobiDBLite consensus disorder prediction 128 160 - -
Trme61118g00001 192 FunFam Early nodulin-like protein 1 20 125 - -
Trme61118g00001 192 SUPERFAMILY Cupredoxins 20 121 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61118g00001 Trme-Chr61118 108 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61118g00001 5 184 Phytocyanin Superfamily AT4G28365 45.455 2.36e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61118g00001 - - vvo:131598244 206.068