Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61106g00001 ATGTCTCTTCCTGAGTACCCAGTTGGACTAGAGTCCCGTGTAGGCAATATGATTCCATTGATTGAAAATCAATCAAGCAATGTTTGTATGGTAGGCATCTGGGGAATGGGAGGATTGGGTAAAACTACCACAGCCAAAGCCATCTACAATCAAATTCATCGCAAATTTGTGTATAGAAGTTTCATTGAAAATATTAGAGAAACTTATGAGACGGATAATAGAGGCCGATGGGATATTCGTTTACAAGAACAACTTCTTTCAGATCTCCTCAAAACAAAGGAGAAGATACACAACATTGCCTCCGGAACAACTGCAATCAAGAAAATGCTCTCAGCAAAAAAGGTACTCATTGTACTTGATGATGTGACCAAAGAAGAACAAGTTAAAGCCCTATATAGAAGTCGTAAGTGGTTTGGATCAGGAAGTGTAATAATTGCTACAAGCAGGGATAAACACATACTTAAGTCACTTCAAGTTGACCATATCTATACAGTTACCGAAATGGACCAAAAGGAGTCCCTTGAGCTTTTCTGTTGGCATGCTTTTAGAAAGGAAAGTCCAAGAGAAGACTTCAATGAGCTCTCAAGAAATGCCAAGAGAAGAATGGACAAGTGTGTTATCAAAACTAAAGGTAATTCCCGACCAACAAGTGCACGAGAAACTAAGAATAAGCTACGATGGTCTAAGGGATGGCAAGGAAAAGGATATATTTCTTGA 717 0.3891 MSLPEYPVGLESRVGNMIPLIENQSSNVCMVGIWGMGGLGKTTTAKAIYNQIHRKFVYRSFIENIRETYETDNRGRWDIRLQEQLLSDLLKTKEKIHNIASGTTAIKKMLSAKKVLIVLDDVTKEEQVKALYRSRKWFGSGSVIIATSRDKHILKSLQVDHIYTVTEMDQKESLELFCWHAFRKESPREDFNELSRNAKRRMDKCVIKTKGNSRPTSARETKNKLRWSKGWQGKGYIS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61106g00001 238 Pfam NB-ARC domain 20 201 IPR002182 GO:0043531
Trme61106g00001 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 199 IPR027417 -
Trme61106g00001 238 PRINTS Disease resistance protein signature 30 45 - -
Trme61106g00001 238 PRINTS Disease resistance protein signature 109 123 - -
Trme61106g00001 238 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 198 IPR044974 GO:0006952
Trme61106g00001 238 Gene3D - 3 164 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61106g00001 Trme-Chr61106 61 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61106g00001 8 195 WRKY Transcription Factor Family AT5G45050 34.375 3.14e-26 105