Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61085g00001 AACTCGGCCGCGTTAATTGAAATCGTTGTCTCCGGGACTCACTTGCCGGAGATCCGTGCTCAGGTGAGTAATGTTGACGGGATCTACGAAGGCGTTGTGGAGATACTCAGGAATCCGATCTCGTATCCTCGTGCGCTCAAGGTAGGGATTAAAGCCTTGTTTGCGCTATGTTTAGTGAAACAGACGCGCCACCGTGCTGTTGCCGCCGGTGCGCCAGCGGTACTTGTCGATCGGCTCGCTGATTTCGAGAAGTGTGATGCGGAGAGGGCGTTAGCAACGGTGGAGTTATTGTGCCGAGTTCCGGCAGGTTGCGMGGMGTTCGCCGGTCATGCGCTMACAGTACCRATGCTTGTGAAGATAATACTGAAGATATCGGATCGTGCGACGGAGTACGCTGCCGGAGCGCTTATGGCACTGTGTTCTGAATCGGAACGGTGTCAGCGTGAGGCGGTTGCGGCGGGAGTGCTGACTCAGCTTTTGCTTCTG 486 0.5514 NSAALIEIVVSGTHLPEIRAQVSNVDGIYEGVVEILRNPISYPRALKVGIKALFALCLVKQTRHRAVAAGAPAVLVDRLADFEKCDAERALATVELLCRVPAGCXXFAGHALTVPMLVKIILKISDRATEYAAGALMALCSESERCQREAVAAGVLTQLLLL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61085g00001 162 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 162 - -
Trme61085g00001 162 SUPERFAMILY ARM repeat 13 160 IPR016024 -
Trme61085g00001 162 Gene3D - 1 162 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61085g00001 1 162 U-box Gene Family AT3G19380 64.417 1.84e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61085g00001 - - var:108341190 285.804