Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61053g00001 ATGGCACATGTCGAATCATTGTTATGCACTGGATCAGCTGATGTACGGATTATTGGTATTTGGGGTATGGGTGGTATAGGCAAGACAACCATTGCAGAGGCTATATATACAAAAGTCTCTTCTCAATACGAGGGATGCTACTTCGCTGCCAATGTGAGGGAAAATTGGGAATATTCTAGAAAAAACGAGTTACGGACAAAACTTCTGGCTGGTGTATTAGGGGACCAAAACCTGGATATTAGCACCCCTACTATAAGTTCCACTTTTGTTGTAGGAAGGCTTCGACGTAAAAAGCTTCTCATTGTTCTCGATGACATAAGTGATTCCAAACAAATAGAATATCTTGTTGGCGAGAAAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACGACCAGAAATAAAGAAGTGTTTAACAGTGGAGTTGATGAATTATACCAAGTGAAGGTATTGAATTCTCATGAATCACTAAAGCTTTTTAGCTTGAATGCCTTTCAACAAGACCATCCAATGAGGGAATACCAACACTTGTCAGACAGGGCAGTAGATTATGCTAAGGGCAWTCCTCTAGCTCTTAAAATTCTGGGTTCCTATCTTTGTRCCAAACGACCAAAAGAATGGGAGAGYGCACTGGAGAAACTGAAGAAAATTCCCAAAGCTGAAATTTATGATGTGTTAAGATTGAGTTATGAAGGATTAGACCCTGAAGAGCAGAATATATTTTTAGATATTGCCTGCTGTTTGAAAGGAGAAACAAAATGCAGTATAACAAGAATATTAGAAGGCTGCGGTTTTTCGACCGAAATTGGGATGAGAAGCCTCGAAGATAAGTCTCTTGTAACCATTTCCAAAGGCAA 857 0.3944 MAHVESLLCTGSADVRIIGIWGMGGIGKTTIAEAIYTKVSSQYEGCYFAANVRENWEYSRKNELRTKLLAGVLGDQNLDISTPTISSTFVVGRLRRKKLLIVLDDISDSKQIEYLVGEKDWFGPGSRIIVTTRNKEVFNSGVDELYQVKVLNSHESLKLFSLNAFQQDHPMREYQHLSDRAVDYAKGXPLALKILGSYLCXKRPKEWESALEKLKKIPKAEIYDVLRLSYEGLDPEEQNIFLDIACCLKGETKCSITRILEGCGFSTEIGMRSLEDKSLVTISKG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61053g00001 285 PRINTS Disease resistance protein signature 17 32 - -
Trme61053g00001 285 PRINTS Disease resistance protein signature 185 199 - -
Trme61053g00001 285 PRINTS Disease resistance protein signature 93 107 - -
Trme61053g00001 285 FunFam Disease resistance protein (TIR-NBS-LRR class) 152 234 - -
Trme61053g00001 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 244 IPR027417 -
Trme61053g00001 285 Gene3D - 1 145 IPR027417 -
Trme61053g00001 285 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 282 IPR044974 GO:0006952
Trme61053g00001 285 Gene3D - 150 234 IPR042197 -
Trme61053g00001 285 Pfam NB-ARC domain 7 217 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61053g00001 Trme-Chr61053 1 857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61053g00001 1 285 WRKY Transcription Factor Family AT5G45050 38.356 1.77e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61053g00001 - - tpra:123891409 534.258