Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60991g00001 ACCAATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTGGAAAAGATATGGGAGATAACAGCCAATAACATAATAATGGTTTCTGCAATTGGAAATGATGGACCACTATATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGCGGTATTGACTATAGTGACCATATAGCTTCCTTTTCCTCACGTGGCATGAGTACCTGGGAACTTCCTCATGGTTATGGCCGTGTGAAGCCAGACGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGGACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAACCTGATCGCAAAAATCTCTTAAATCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAACTCGCTGGGCCTAACATGTACGAGCAGGGTGCTGGCAGAGTTGATCTGTAG 522 0.4368 TNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNLLNPASMKQALVEGAAKLAGPNMYEQGAGRVDL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60991g00001 173 ProSitePatterns Serine proteases, subtilase family, serine active site. 114 124 IPR023828 -
Trme60991g00001 173 Gene3D Peptidase S8/S53 domain 1 173 IPR036852 GO:0004252|GO:0006508
Trme60991g00001 173 ProSiteProfiles Serine proteases, subtilase domain profile. 1 173 - -
Trme60991g00001 173 Pfam Subtilase family 2 161 IPR000209 GO:0006508|GO:0008236
Trme60991g00001 173 SUPERFAMILY Subtilisin-like 2 173 IPR036852 GO:0004252|GO:0006508
Trme60991g00001 173 PANTHER PEPTIDASE S8 2 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60991g00001 Trme-Chr60991 2 863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60991g00001 1 173 Subtilisin-like Serine Gene Family AT5G19660 93.642 2.54e-110 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60991g00001 K08653 - gmx:100819188 342.043