Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60848g00001 CCTAGGAATACCGCAATTCCTACAAGCAAGGAACATGTATTCACGACGCATTTTAACAACCAAACCAATATTCTAATTCATGTTTATGAGGGTCAGAGGCAAACAACTAGGGACAACAACTTGCTAGGAAAATTTGCCATAAATGATAAAGAGATTAGCTCAAAGCTTTCCTTAAAAGACAAGAAAGTGATCAATGAAGCAATTGATTTAGTCTTAATGTGGCTAGATGTCAATGTGGTTGCAATGCAACATGATTTTGAATATTATAGAACCATTCTTTCAAATGTGTTTGATCCAATTATTGAGAAGATGATAAACGATGAGGAACTCGGTACCGCTGATTCTGCTGTTGATATTAAAAAAAAAGTTGAATGTACAGAGGAATAG 387 0.3488 PRNTAIPTSKEHVFTTHFNNQTNILIHVYEGQRQTTRDNNLLGKFAINDKEISSKLSLKDKKVINEAIDLVLMWLDVNVVAMQHDFEYYRTILSNVFDPIIEKMINDEELGTADSAVDIKKKVECTEE 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60848g00001 128 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 46 110 IPR029048 -
Trme60848g00001 128 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 63 IPR029047 -
Trme60848g00001 128 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 51 IPR029047 -
Trme60848g00001 128 Pfam Hsp70 protein 2 49 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60848g00001 Trme-Chr60848 1 387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60848g00001 1 48 Calmodulin-binding Proteins AT3G12580 60.417 3.23e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60848g00001 K03283 - gmx:100783822 80.8777