Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60815g00001 ATGGCTGATTCAGAAAAAGAGCTTCGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTATTGGGCTCGGAGCTTTTTACAAGATTTGGAAAGGGCTTGTTTTGATCATGTACGACGAAGGTGGTGGGGAATTGGGTTTGGATTAAGTTTTAAAGTCGTAGCACTCGACCCAAACTTTAGGAAGCTCTCGATGGATCACATAGTTTCGGCTTACAAACGGACAACAAATAGGGCTATTCTTCTAGACTATGATGGTACACTAATGCCTCAGGTTTCCATTGATAAGAGTCCAATAGGTAAATCCATTGAAATTCTTAATAGCTTGTGTAGAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCCAGAAGCCGAAAGACACTCTCTGAATGGTTTTCTCCTTGCGAGAATCTGGGAATCGCGGCCGAGCACGGCTACTTTCTGAGGTAA 459 0.4227 MADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERACFDHVRRRWWGIGFGLSFKVVALDPNFRKLSMDHIVSAYKRTTNRAILLDYDGTLMPQVSIDKSPIGKSIEILNSLCRDKNNVVFLVSARSRKTLSEWFSPCENLGIAAEHGYFLR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60815g00001 152 SUPERFAMILY HAD-like 81 151 IPR036412 -
Trme60815g00001 152 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 152 IPR001830 GO:0003824|GO:0005992
Trme60815g00001 152 Gene3D - 80 152 IPR023214 -
Trme60815g00001 152 Pfam Trehalose-phosphatase 84 152 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60815g00001 Trme-Chr60815 17 475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60815g00001 1 152 Trehalose Biosynthesis Gene Families AT1G68020 80.263 4.02e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60815g00001 K16055 - gmx:100818822 286.574