Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60795g00001 ATGTTTGATAAGTGGCAAGCTCAAGTATGGTGGGGTGAGAACTTTGACAGACTAAGGGAGCTTTATAATGTCCAGACATTCAATCGTCAAGCTCTTAACACTACTCCTCCACCATCTGAAGATGAGCAGAGAGATTCTGCGGCTTATTGGAGGCTTCATACTGGAGGAGATTGCCCTATGGCTGGATGGTTCAATGATTCAGCAGAAAGGAATCAGTACTATAATCCTGCAAGATTCACTATGGGTCAAGGAAGCAGTAGCCACCAACAAATTCATGCTGCTGCTGGGTCATCCATGGAAGCATCAAGGATTTCTTCTAAAGATGAGCTTTCCTTCAGCAATGCAAGTGAAATTGAATCTGAATGGTTGGAGCAAGTTGAGCCTGGAGTGTTTGTTACAATCAGGCAGTTACCTGATGGGAGCAAGGAGATTCGTCGTATCAGATTCAGGTAA 453 0.4415 MFDKWQAQVWWGENFDRLRELYNVQTFNRQALNTTPPPSEDEQRDSAAYWRLHTGGDCPMAGWFNDSAERNQYYNPARFTMGQGSSSHQQIHAAAGSSMEASRISSKDELSFSNASEIESEWLEQVEPGVFVTIRQLPDGSKEIRRIRFR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60795g00001 150 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Trme60795g00001 150 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 149 IPR044532 -
Trme60795g00001 150 MobiDBLite consensus disorder prediction 79 100 - -
Trme60795g00001 150 ProSiteProfiles BRX domain profile. 120 150 IPR013591 -
Trme60795g00001 150 Pfam Transcription factor regulating root and shoot growth via Pin3 119 149 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60795g00001 Trme-Chr60795 188 733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60795g00001 1 149 Major Intrinsic Protein MIP AT1G31880 43.506 1.38e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60795g00001 - - mtr:11415593 179.104