Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60794g00001 AAGGCTCATGAATGTCCGAAACACGACCACAACAGCAGAAAAGTGGTTGTTTGCGAAGAATGCTCCATGTCCATGGAGATCACAAACAACACCGGAGAAAACGAAGAAATGATCTTAAAAAAGCACCACACTTCAGGGAAGTGTGACCCTAGCAAGAAGAAGAAACCGACTTGCCCGGTGAAGCGTTGCAAAGAGATTTTGACNTTTTCTAACACGAGTATTTGTAAAACTTGCCACATTAAGGTGTGTCTCAAACACCGTTTTGCGGCCGATCATGCTTGTAGTAAAGGAGATTCATCTTCCTCCTTAACAAATGCTGCTGGTAATGGAAGATGGAATAATAGGTTTATGGCTGCTTTGGCTTCAAGGAATAATCAAGATTGTGCCAAAAAAGCTGGAACTCGTTCTACTACTTCTCCTCCTAGTACTCCTTCTGTTAAGGCTTATTGA 450 0.4222 KAHECPKHDHNSRKVVVCEECSMSMEITNNTGENEEMILKKHHTSGKCDPSKKKKPTCPVKRCKEILTFSNTSICKTCHIKVCLKHRFAADHACSKGDSSSSLTNAAGNGRWNNRFMAALASRNNQDCAKKAGTRSTTSPPSTPSVKAY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60794g00001 149 Pfam AN1-like Zinc finger 58 96 IPR000058 GO:0008270
Trme60794g00001 149 MobiDBLite consensus disorder prediction 127 149 - -
Trme60794g00001 149 ProSiteProfiles Zinc finger AN1-type profile. 52 102 IPR000058 GO:0008270
Trme60794g00001 149 SUPERFAMILY AN1-like Zinc finger 44 96 IPR035896 -
Trme60794g00001 149 Gene3D - 32 111 IPR035896 -
Trme60794g00001 149 MobiDBLite consensus disorder prediction 125 149 - -
Trme60794g00001 149 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 1 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60794g00001 1 128 C2H2 Transcription Factor Family AT3G28210 55.039 7.33e-45 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60794g00001 - - aprc:113867149 231.876