Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60697g00001 ATGGCGGGTTTGTCTTACAGAGAAGAGGAAAAGTTCTTGGATGTCATTTGCACGGCTTCCAAATTGAAGCACCCCAACATCATACAACTCAATGGTTACTGTTTAGAGCACGGAGAGCATCTTCTTGTTTATGATTACTTTGGAAATCTAACTCTAAACGATGCTCTTCATGGTGGAGCATGTGAACCACTATCATGGGTCCAACGTCTTCAGATTGCTCTAGCTGTTGCTCAGGCTCTCGACTATTTGCACTCGGCGTGCTGCCCTCCTGTGGCCCATGGTAACTTGAAGGCAGCCAATGTTCTACTGGATGAAAATTTGATGCCTCATATTTGTGACAGTAGCTTGGCTATTTTGAGACCACTGGTGAAGAGCAATCAAGTTAAAATTCCA 393 0.4427 MAGLSYREEEKFLDVICTASKLKHPNIIQLNGYCLEHGEHLLVYDYFGNLTLNDALHGGACEPLSWVQRLQIALAVAQALDYLHSACCPPVAHGNLKAANVLLDENLMPHICDSSLAILRPLVKSNQVKIP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60697g00001 131 SUPERFAMILY Protein kinase-like (PK-like) 8 122 IPR011009 -
Trme60697g00001 131 Pfam Protein tyrosine and serine/threonine kinase 7 118 IPR001245 GO:0004672|GO:0006468
Trme60697g00001 131 Gene3D Transferase(Phosphotransferase) domain 1 2 129 - -
Trme60697g00001 131 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme60697g00001 131 PANTHER OS01G0253100 PROTEIN 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60697g00001 Trme-Chr60697 80 573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60697g00001 1 130 Strubbelig Receptor Gene Family AT5G06820 60.000 3.69e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trme60697g00001 PK_Tyr_Ser-Thr 2.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60697g00001 - - mtr:11428201 234.958