Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme606613g00001 ATGGCTACATGGAAGGTTGCTCCTGCTCTTGCTGCTGGCTGTGCTGCGATATTGAAGCCATCTGAATTGGCATCTCT 77 0.5065 MATWKVAPALAAGCAAILKPSELASL 26
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme606613g00001 26 Pfam Aldehyde dehydrogenase family 1 25 IPR015590 GO:0016491
Trme606613g00001 26 SUPERFAMILY ALDH-like 1 25 IPR016161 GO:0016491
Trme606613g00001 26 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 26 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme606613g00001 Trme-Chr606613 24 100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme606613g00001 1 26 Aldehyde Dehydrogenase Gene Family AT3G48170 88.462 1.72e-09 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme606613g00001 K00130 - dcr:108223075 47.7506