Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60645g00001 ATGGTATCAACTCCTGAACTCATTAGTGTGTTGGCTTCAATATTGGACACTGATGAGCTCGAAGTGCAGGAGCAAGCTGTCTCTTGTCTCCTAATTTTGTGCAACAGAAGTGAACAATGTTCTGACATGGTCCTGCAAGAAGGGGTTATACCTGCATTGGTATCAATATCAGTGAATGGGACCTCAAGAGGACAAGAAAAAGCTCAGAAACTCTTGATGCTATTCCGACAGCAGCGACGAGATGATTCACCTGTTGAGACACATCAGTCTCCTCCTGAAACTAGTGATTTCTCTGTGCCACCTGCTGAAATGAAACCTCTATGTAGTAACTATTCTGTTTTCCTCAAGTATTTCAACTTTAAGCTTTTACCTTTGTTTCAGCACGATGCTGGTAG 395 0.4253 MVSTPELISVLASILDTDELEVQEQAVSCLLILCNRSEQCSDMVLQEGVIPALVSISVNGTSRGQEKAQKLLMLFRQQRRDDSPVETHQSPPETSDFSVPPAEMKPLCSNYSVFLKYFNFKLLPLFQHDAG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60645g00001 131 MobiDBLite consensus disorder prediction 79 102 - -
Trme60645g00001 131 PANTHER U BOX DOMAIN-CONTAINING 4 79 - -
Trme60645g00001 131 SUPERFAMILY ARM repeat 6 74 IPR016024 -
Trme60645g00001 131 Gene3D - 1 74 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60645g00001 Trme-Chr60645 105 813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60645g00001 1 112 U-box Gene Family AT1G27910 58.197 1.39e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60645g00001 - - gmx:100794099 179.104