Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60579g00001 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCATCAAGAAAGAACAAGAACAAGGCTATTGTTAGTGAAAATGCACCTTTGTTGCCTAAAAGTCAAGCCCATGAAAGTGATTCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACCTTGAAACAGTTGGGGTTGATTCCTGGTCTTGCTGCTATACTCATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAAATTTGTGTTATTGTTAATAACATTGGTGTGCTGATCGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCATCAAGTGGAGAACATCACTATGGTATCC 496 0.3891 MTIGSLAPKTEKKKSSRKNKNKAIVSENAPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60579g00001 165 PANTHER AMINO ACID TRANSPORTER 40 156 - -
Trme60579g00001 165 MobiDBLite consensus disorder prediction 1 24 - -
Trme60579g00001 165 Pfam Transmembrane amino acid transporter protein 50 158 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60579g00001 Trme-Chr60579 1 829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60579g00001 2 165 Amino Acid or Auxin Permease AAAP Family AT3G30390 58.537 7.55e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60579g00001 K14207 - vum:124822180 267.314