Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60529g00001 ATGAATAAGGTAAGGGTTGAGATAGACACTTATTTGAAACAAGATCAACTTATGAATGAATCAGATGCTATGAAACTAAACTACTTGCAAAAGGTAATTATGGAGACACTTCGTTTATACCCTGTGGCTCCATTATTAATACCACATGAGTCTTCCAATGATTGTAATGTTTGTGGATTTAATATACCANAAGGGACAATGCTTCTTGTGAATCTATGGACACTACATAGAGACCCCAATATATGGATAAATCCAACATGGTTTGTGCCAGAGAGATTTGAAGAAGGAGAATTAAGTAATGATGAAATTTATAATATGATTCCATTTGGTATTGGAAGAAGATCTTGTCCTGGTTCTGTTTTAGCAAAACGTTTTATGGGACATGCAATAGGATCTTTGATTCAATCTTTTGAGTGGGAGAGAATAGGAGATGAAAAAATTGATATGAGTGATGGAATAGGGCTTACAATGCCTAAAGTTGAACCTTTGGTTGCATTATGCAAGCCACGCCAAGTTATGATCAAGGCTTTGTCCAATATGTAA 543 0.3499 MNKVRVEIDTYLKQDQLMNESDAMKLNYLQKVIMETLRLYPVAPLLIPHESSNDCNVCGFNIPXGTMLLVNLWTLHRDPNIWINPTWFVPERFEEGELSNDEIYNMIPFGIGRRSCPGSVLAKRFMGHAIGSLIQSFEWERIGDEKIDMSDGIGLTMPKVEPLVALCKPRQVMIKALSNM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60529g00001 180 Gene3D Cytochrome P450 1 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS P450 superfamily signature 116 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS P450 superfamily signature 107 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 SUPERFAMILY Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 Pfam Cytochrome P450 2 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 109 118 IPR017972 GO:0005506|GO:0016705
Trme60529g00001 180 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS E-class P450 group I signature 106 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS E-class P450 group I signature 116 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme60529g00001 180 PANTHER CYTOCHROME P450 82C3-RELATED 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60529g00001 Trme-Chr60529 254 796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60529g00001 1 177 Cytochrome P450 AT4G37360 54.237 2.91e-66 209