Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme60529g00001 | ATGAATAAGGTAAGGGTTGAGATAGACACTTATTTGAAACAAGATCAACTTATGAATGAATCAGATGCTATGAAACTAAACTACTTGCAAAAGGTAATTATGGAGACACTTCGTTTATACCCTGTGGCTCCATTATTAATACCACATGAGTCTTCCAATGATTGTAATGTTTGTGGATTTAATATACCANAAGGGACAATGCTTCTTGTGAATCTATGGACACTACATAGAGACCCCAATATATGGATAAATCCAACATGGTTTGTGCCAGAGAGATTTGAAGAAGGAGAATTAAGTAATGATGAAATTTATAATATGATTCCATTTGGTATTGGAAGAAGATCTTGTCCTGGTTCTGTTTTAGCAAAACGTTTTATGGGACATGCAATAGGATCTTTGATTCAATCTTTTGAGTGGGAGAGAATAGGAGATGAAAAAATTGATATGAGTGATGGAATAGGGCTTACAATGCCTAAAGTTGAACCTTTGGTTGCATTATGCAAGCCACGCCAAGTTATGATCAAGGCTTTGTCCAATATGTAA | 543 | 0.3499 | MNKVRVEIDTYLKQDQLMNESDAMKLNYLQKVIMETLRLYPVAPLLIPHESSNDCNVCGFNIPXGTMLLVNLWTLHRDPNIWINPTWFVPERFEEGELSNDEIYNMIPFGIGRRSCPGSVLAKRFMGHAIGSLIQSFEWERIGDEKIDMSDGIGLTMPKVEPLVALCKPRQVMIKALSNM | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme60529g00001 | 180 | Gene3D | Cytochrome P450 | 1 | 169 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | P450 superfamily signature | 116 | 127 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | P450 superfamily signature | 31 | 42 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | P450 superfamily signature | 107 | 116 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | SUPERFAMILY | Cytochrome P450 | 1 | 170 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | Pfam | Cytochrome P450 | 2 | 160 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 109 | 118 | IPR017972 | GO:0005506|GO:0016705 | |
Trme60529g00001 | 180 | PRINTS | E-class P450 group I signature | 30 | 48 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | E-class P450 group I signature | 106 | 116 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | E-class P450 group I signature | 116 | 139 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PRINTS | E-class P450 group I signature | 71 | 95 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trme60529g00001 | 180 | PANTHER | CYTOCHROME P450 82C3-RELATED | 1 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme60529g00001 | Trme-Chr60529 | 254 | 796 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme60529g00001 | 1 | 177 | Cytochrome P450 | AT4G37360 | 54.237 | 2.91e-66 | 209 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme60529g00001 | - | K13260 | gmx:100794610 | 287.345 |