Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme604g00001 ATGCCTTTGATGTTTGGGAGGAAGATAATTGCTGGTAGTGCTGGTGGAGGAATGAAAGAAAGCCAAGACATGATTAATTTTGCAGCAAAGCACAATATCACAGCAGATATTGAAGTGATTCCTGTGGATTATGTGAACACTGCTTTTGAGAGGCTTGCAAAGAATGATGTTAAATACAGATTTGTCATTGATGTGGCTAACACTCTTAATGTTTCTCATATTGATTAA 228 0.3684 MPLMFGRKIIAGSAGGGMKESQDMINFAAKHNITADIEVIPVDYVNTAFERLAKNDVKYRFVIDVANTLNVSHID 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme604g00001 75 Gene3D - 7 71 - -
Trme604g00001 75 PANTHER ALDEHYDE REDUCTASE 1 68 IPR047109 GO:0016616
Trme604g00001 75 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 66 IPR036291 -
Trme604g00001 75 FunFam Putative cinnamyl alcohol dehydrogenase 6 36 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme604g00001 Trme-Chr604 3432 3930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme604g00001 1 70 Monolignol Biosynthesis Gene Families AT4G37990 70.000 4.11e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme604g00001 K23232 - zju:107425058 127.487