Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60372g00001 GTTGAAAAGGCAGTGTGGCGCCAAGATGAGAAGCCGTGTGATGGAGGAGAAGATAAAGAAGAGCCCATGGCTGATGAAGATGATGATTTCCATTTTTTCCCAACTGATGCTAATCCTGAAGAACCGATATCGGAAGAAAACCAAAGCGTTTGGTCATTAATTCCTGAACTCAAAGAAAAGTTGCATGTGCACCAAAAGAAAGCTTTTGAGTTTCTTTGGCAAAACATTGCAGGGTCAACAAATCCAGGACTAATTGAAGCCGAATCCAAAAAAAGAGGTGGCTGTGTGATATCTCATACTCCTGGTGCCGGAAAAACTTTTCTCATCATCGCTTTTCTTGTCAGCTACTTGAAGTTATTCCCTGGGAAGAGACCTCTAGTTCTTGCTCCGAAAACTACGCTCTATACTTGGTATAAAGAATTTATCAAGTGGGAGATTCCTATACCGGTGTACTTGATTCACGGTCGTAGAACCTATAGAGTGTTCAAGCAGAATTCAGTTGCGGTTCTTCCTGGAGTTCCCAAGCCTACCGATGATGTCAAGCATGTTTTGGATTGCCTTGAGAAGATACAAAAATGGCATTCGCATCCGAGTGTTCTAATCATGGGCTACACTTCGTTTTTAACATTGATGCGAGAGGATTCGAAGTTTGCACACAGAAAGTTTATGGCGAAAGTGTTGAGGGAAAGTCCTCAACTCTTGGTACTTGATGAAGGTCACAATCCTAGAAGCACTAAATCAAG 743 0.4226 VEKAVWRQDEKPCDGGEDKEEPMADEDDDFHFFPTDANPEEPISEENQSVWSLIPELKEKLHVHQKKAFEFLWQNIAGSTNPGLIEAESKKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFKQNSVAVLPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKFMAKVLRESPQLLVLDEGHNPRSTKS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60372g00001 247 MobiDBLite consensus disorder prediction 1 18 - -
Trme60372g00001 247 Pfam SNF2-related domain 57 247 IPR000330 GO:0005524|GO:0140658
Trme60372g00001 247 MobiDBLite consensus disorder prediction 1 44 - -
Trme60372g00001 247 Gene3D - 36 247 IPR038718 -
Trme60372g00001 247 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 9 247 IPR044567 GO:0080188
Trme60372g00001 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 242 IPR027417 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Trme60372g00001 SNF2_N 2.5e-10 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60372g00001 K10875 - gmx:100811703 417.542