Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60367g00001 ATGGAAGGTGTCTTTGGGAATGTAAGAAGGTTAGCTGTGACTGGCAATAATAAGCTTTGTGGAGGTATTCCTGGACTTCATCTGCAGTCATGCCCTATTAGAGGTCTGAAACATGCAAAACACTACAAAATCAAGTTGATAGTAGTGATTCTTAGTGTGATATCCATTCTTCTCATGATGATAATTATCCTAACTATCTATTGCATGAGGAAAAGAAACCATAAACAATATTCTGATTCACCAACAACTAACCCGCTAGCCAAGGTTTCATACCCAGACCTTCACAATGGAACTGATGGGTTTTCTCCTAGCAACTTGTTGGTCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGCCATTGACAATACCTCTCACAAGGAAAGTAGTACAATTGGAATTAAAGGAACTATTGGATATGCTCCTCCTGAGTATGGAATGGGTTCTGAAATATCCACATACGGTGACATGTATAGCTTTGGAGTTCTTATGCTGGAAATGCTTACAGGAAGAAGACCAACAAATGAAATGTTTGAAGATGGTCAAAATCTACACAT 614 0.3876 MEGVFGNVRRLAVTGNNKLCGGIPGLHLQSCPIRGLKHAKHYKIKLIVVILSVISILLMMIIILTIYCMRKRNHKQYSDSPTTNPLAKVSYPDLHNGTDGFSPSNLLVIHCDLKPSNVLLDDDMIAHVSDFGIARLVSAIDNTSHKESSTIGIKGTIGYAPPEYGMGSEISTYGDMYSFGVLMLEMLTGRRPTNEMFEDGQNLH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60367g00001 204 Gene3D Transferase(Phosphotransferase) domain 1 94 204 - -
Trme60367g00001 204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Trme60367g00001 204 SUPERFAMILY Protein kinase-like (PK-like) 105 196 IPR011009 -
Trme60367g00001 204 Pfam Protein kinase domain 108 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme60367g00001 204 PANTHER OS04G0122200 PROTEIN 2 107 - -
Trme60367g00001 204 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60367g00001 Trme-Chr60367 30 845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60367g00001 108 197 Receptor kinase-like Gene Family AT3G47090 64.835 6.48e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trme60367g00001 Pkinase 3.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60367g00001 - - ccaj:109792361 179.104