Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme603480g00001 GTTATTAGTTTGATAGAGAGATTTTATGATCCACAAGGTGGTGAAATTCTCATTGACGGTATCAACCTCCGAGAATTTCAACTGAAATGGATCCGACAGAAAATAGGCCTAGTCAGTCAAGAACCAGTTCTCTTTGCTGGTAGCATTAAAGAGAACATTGGCTATGGTAAGGATGCGGCAACCGATGAAGAAATCAAAGCTGCAGCCGAACTTGCTAATGCTGCTAACTTCATCGATAAATTCCCTCATGTGAGCTCTTAA 261 0.41 VISLIERFYDPQGGEILIDGINLREFQLKWIRQKIGLVSQEPVLFAGSIKENIGYGKDAATDEEIKAAAELANAANFIDKFPHVSS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme603480g00001 86 Pfam ABC transporter 2 76 IPR003439 GO:0005524
Trme603480g00001 86 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 83 IPR027417 -
Trme603480g00001 86 Gene3D - 1 83 IPR027417 -
Trme603480g00001 86 PANTHER ABC TRANSPORTER B FAMILY 1 83 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme603480g00001 Trme-Chr603480 1 261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme603480g00001 1 82 Calmodulin-binding Proteins AT2G36910 59.756 2.59e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme603480g00001 K05658 - gmx:100777713 145.976