Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60288g00001 TATGAACCTGAGCTGATCAAGAAGATTGTTGAAGACACTGTTCCTAAGTTACCTCCTGTACCGGCACCAATGAAAGACATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANATGACACCATTTGCATGATGAAAATTTATGGAACTGGTGGAATTGGAAAAACCACACTTGCCATGGATATCTTTAACAAGATCAGGCGTCAATTTGAAGCTGCGAGTTTTCTTGCTAATGTAAGAGAAAAATCGAACAGAAGCGCCAAAGGCTTGGAAGATCTCCAAAGGACACTTCTAACTGAGATGGGTGAGGAGGCAGAAGAAACCATGTTGGGAAGTACTTTTAAATCAGGAAGCTTTGAAATAAAGCGCAAGCTTGGCCATAAAAGAGTTCTTCTTGTTTTGGACGATGTTGATTCTCTAAAACAAATAGAAGCACTAACTGGAGGTTGT 471 0.3546 YEPELIKKIVEDTVPKLPPVPAPMKDXXXXXXXXXXXXXXXXXXXXDTICMMKIYGTGGIGKTTLAMDIFNKIRRQFEAASFLANVREKSNRSAKGLEDLQRTLLTEMGEEAEETMLGSTFKSGSFEIKRKLGHKRVLLVLDDVDSLKQIEALTGGC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60288g00001 157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 153 IPR044974 GO:0006952
Trme60288g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 153 IPR027417 -
Trme60288g00001 157 Coils Coil 24 26 - -
Trme60288g00001 157 Gene3D - 20 157 IPR027417 -
Trme60288g00001 157 PRINTS Disease resistance protein signature 51 66 - -
Trme60288g00001 157 PRINTS Disease resistance protein signature 131 145 - -
Trme60288g00001 157 Pfam NB-ARC domain 50 146 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60288g00001 Trme-Chr60288 412 882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60288g00001 54 155 WRKY Transcription Factor Family AT4G12020 34.314 6.66e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60288g00001 - - tpra:123920924 181.8