Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme602464g00001 GACCAGATGAAGAATGCAATGAAGATCAATGATTGGGTTAGTTTGCAAGAGAGTTTTGACAAGATCAACAAACAACTAGAGAAAGTGATGCGTGTTGCTGAGACTGATAAGGTCCCTAAGCTTTATATTAAGGCTCTTGTCTTGTTGGAAGATTTCTTGGCTCAGGCTTTGGCAAATAAGGATGCCAAGAAGAAGATGAGCAGTAGCAATGCCAAAGCCTTGAACTCGATGAAGCAGAAATTGAAGAAGAATAATAAGCAATAT 264 0.3902 DQMKNAMKINDWVSLQESFDKINKQLEKVMRVAETDKVPKLYIKALVLLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQY 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme602464g00001 88 MobiDBLite consensus disorder prediction 64 82 - -
Trme602464g00001 88 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 88 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Trme602464g00001 88 MobiDBLite consensus disorder prediction 64 88 - -
Trme602464g00001 88 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 88 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme602464g00001 Trme-Chr602464 1 264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme602464g00001 1 77 Eukaryotic Initiation Factors Gene Family AT3G56150 80.519 1.29e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme602464g00001 K03252 - mnt:21400757 151.369