Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60128g00001 ACATTGGCTGAGAAAGCTGCATGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCTGGTACTGTGATGGGTCCTGTTATTCCACCAAGACTTAATGCAAGCATGCTCATGCTTGTGAGACTTCTTGAAGGCTGCACTGAAACATTTGAAGACTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCNNNNNNTNNNNNNNNNNTNNNNNNNNNNAAAGAAGCATCTGGTAGACATTTGTGTGTTGAAACTATCTCTCACTATGGTGATTTTGTGGCAAAAGTTGCTGAACTTTATCCAGAATATAATGTTCCTAG 329 0.3647 TLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLEGCTETFEDYFMGLVHFKDVAXXXXXXXXXKEASGRHLCVETISHYGDFVAKVAELYPEYNVP 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60128g00001 109 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 107 IPR036291 -
Trme60128g00001 109 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 108 - -
Trme60128g00001 109 Gene3D - 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60128g00001 Trme-Chr60128 241 882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60128g00001 1 109 Monolignol Biosynthesis Gene Families AT5G58490 75.229 9.68e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60128g00001 - - gsj:114384714 184.882