Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60118g00001 ATGACATATCCTGATATTGATGCTTCAAGTGTAATAGGAAGGGAAAATGAGAAAGATGAAATTATCAAACTTTTGATGCAGCCACATCCTCACGGCGATGGTGATGGTGATAAAAGTGTGTGTGTCATTCCAATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAATGGCGGTGTTCAATGATAAGATGATGGACACACTTTTCCAATTGAAGATGTGGGTGTGTATCTCTAATGATTTCGACATCAGAAAGATAATCATTAAAATCATCAACTCTGCCACTGCTTCAGCACCATCAAGTGGTTTTGCTCACCAAGAAAACATCAACAACTTAGATATTGTGCAACTAGTAAGTAGTATGAGACAAAAACTTTCTGGTCAAAAGTTTTTAGTCGTGTTAGATGACGTATGGAATGATGATCGTGTAAAGTGGTTTGAATTGAAAGATTTGATCAAAGTTGGTGCACCAGGAAGCAAAATTATGGCGACAACACGTAGTAACTCAATTGCTTTGATGATGGGTGATGTTCCCTCGTATGTTTTGCAAGGTCTTTCTCCAAAGGATTGTTTTTCTCTATTTGTCAAATGGGCATTCAAGGAAGGCGCAGAAAAAAAGAATCCAAATCTAGTGGAGATTGGAATAGAAATTGTGAAAAAATGTCAAGGGGTTCCACTAGCTGTGAGAACATTAGGAAGTTCTCTCTTCTCAAACTTTGATACAA 727 0.3824 MTYPDIDASSVIGRENEKDEIIKLLMQPHPHGDGDGDKSVCVIPIVGIGGLGKTTLAMAVFNDKMMDTLFQLKMWVCISNDFDIRKIIIKIINSATASAPSSGFAHQENINNLDIVQLVSSMRQKLSGQKFLVVLDDVWNDDRVKWFELKDLIKVGAPGSKIMATTRSNSIALMMGDVPSYVLQGLSPKDCFSLFVKWAFKEGAEKKNPNLVEIGIEIVKKCQGVPLAVRTLGSSLFSNFDT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60118g00001 242 PRINTS Disease resistance protein signature 125 139 - -
Trme60118g00001 242 PRINTS Disease resistance protein signature 222 236 - -
Trme60118g00001 242 PRINTS Disease resistance protein signature 42 57 - -
Trme60118g00001 242 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 18 236 IPR039203 GO:0050832
Trme60118g00001 242 Gene3D - 186 242 IPR042197 -
Trme60118g00001 242 Gene3D - 4 178 IPR027417 -
Trme60118g00001 242 Pfam NB-ARC domain 36 236 IPR002182 GO:0043531
Trme60118g00001 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 238 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60118g00001 Trme-Chr60118 62 788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60118g00001 45 236 WRKY Transcription Factor Family AT5G45050 30.049 5.18e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60118g00001 - - gmx:100795479 367.851