Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60103g00001 ATGGAGACTATACAGGACCTACTTGACCCTGCCAATGATAACATAGCCATTGCAGAAGATCCCAAAACTGGTGATGTTTCACTACCTGGAGCTACTCTAATCGAGATTACGGACCAGCAGAGTTTTATTGAACTGCTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACAAAAATGAATACTGAGTCTTCAAGAAGTCATGCTATTCTAATGGTGCATGTAAAGAGATCCGTCAAGGGAAGAGATGCTTCACATTCAAGTGAAAATGGAAATCATCCACATATGGTAAAATCGTTAAAGCCGCTTATTGTTCGGAAAGCCAAGCTGGTTATTGTAGATCTTGCTGGTTCAGAACGAATTGACAAATCAGGTCCGTAG 381 0.4147 METIQDLLDPANDNIAIAEDPKTGDVSLPGATLIEITDQQSFIELLRLGEAHRFAANTKMNTESSRSHAILMVHVKRSVKGRDASHSSENGNHPHMVKSLKPLIVRKAKLVIVDLAGSERIDKSGP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60103g00001 126 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 125 IPR027640 GO:0003777|GO:0007018
Trme60103g00001 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 126 IPR027417 -
Trme60103g00001 126 Pfam Kinesin motor domain 1 125 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme60103g00001 126 ProSiteProfiles Kinesin motor domain profile. 1 126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme60103g00001 126 Gene3D Kinesin motor domain 1 126 IPR036961 -
Trme60103g00001 126 ProSitePatterns Kinesin motor domain signature. 108 119 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60103g00001 Trme-Chr60103 345 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60103g00001 2 125 Calmodulin-binding Proteins AT5G65930 34.646 9.96e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60103g00001 - - ahf:112800864 221.476