Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme60001g00001 ATGGATGAAGTGCTTTTGGTGTTTAAAAATCGGTATCGTAAGTTACACACAACAAGATCATGGAACTTCATTGGTTTACCTCTAACTGCTAAGAGAAGATTGAAATTAGAACGTGACATAGTTGTTGCTCTTTTGGACACAGGGATCACGCCGGAGTCGAAAAGCTTCAAGGATGATGGGTTAGGTCCTCCACCAGCAAGATGGAAAGGAGCTTGTGGTCACTATGCTAATTTCTCAGGCTGCAACAAGTAA 252 0.4206 MDEVLLVFKNRYRKLHTTRSWNFIGLPLTAKRRLKLERDIVVALLDTGITPESKSFKDDGLGPPPARWKGACGHYANFSGCNK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme60001g00001 83 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 83 IPR045051 -
Trme60001g00001 83 SUPERFAMILY Subtilisin-like 8 58 IPR036852 GO:0004252|GO:0006508
Trme60001g00001 83 Gene3D Peptidase S8/S53 domain 17 83 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme60001g00001 Trme-Chr60001 463 803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme60001g00001 1 82 Subtilisin-like Serine Gene Family AT4G00230 69.512 1.62e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme60001g00001 - - gmx:100795950 161.77