Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59990g00001 ATGCGGGACTTGAATGCTTCAGAATTTGATCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTTCTATGATCGGTAGGGCTGCTTTGCTTCGCAAAGTTGCTACCAATGTAGAGAACAACGTTTGCATATTGGGCGCTACCGCTATTGAAGATAAATTGCAGCAAGGTGTGCCAGAATCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTATTGACTGGTGACAAACAGGAAACTGCCATATCAATCGGCTACTCCTCAAGGTTACTAACAAGCGGCATGACTCAATTTAGAATTAAGAGCAATAATAGAGAGTCGTGTCGAAGACGTTTACAAGATGCACTTCTCATGTCTAGAAAAAATATGGCTGCACCTGAGGTTGGCAACTATTTTGAAGGAAGTTCCAATGGTGTTGTTTCAACTCCGATGGCTTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGACAATGAACTTGAAGAAGAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTGGCTCCTTTGCAAAAGGCTGGGATTGTCTCTCTTGTGAAGAAAAGGACGGCTGACATGACTCTAGCCATTGGAGATG 619 0.4265 MRDLNASEFDQWHFAFEAASTSMIGRAALLRKVATNVENNVCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDKQETAISIGYSSRLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNMAAPEVGNYFEGSSNGVVSTPMALIIDGTSLVYILDNELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKKRTADMTLAIGD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59990g00001 206 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 206 - -
Trme59990g00001 206 FunFam Phospholipid-transporting ATPase 44 206 - -
Trme59990g00001 206 Gene3D - 40 206 IPR023214 -
Trme59990g00001 206 SUPERFAMILY HAD-like 38 206 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59990g00001 Trme-Chr59990 51 764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59990g00001 1 206 Primary Pumps ATPases AT5G04930 65.534 3.94e-82 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59990g00001 K14802 - gmx:100791888 313.153