Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme599574g00001 ATGGGGTTAATCGATCTCAACACTACTGAGGAAGATGAAACTCCTTATTCAGCTATTTCTTCTTCCTCTTCTTCTTCTCACTCTGGTATAAGTACTTCTGCTTCAGCTATGGTTGTTCCTCTTCAAACTTCTGTTTGTTTGGAACTATGGCATGCTTGTGCTGGTCCTTTGATCTCTTTACCAAAGAAAGGAAGCATTGTTGTTTATGTTCCACAGGGTCACTTTGAACAAGCTCATGATTTTCC 245 0.4 MGLIDLNTTEEDETPYSAISSSSSSSHSGISTSASAMVVPLQTSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme599574g00001 82 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 44 78 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme599574g00001 82 MobiDBLite consensus disorder prediction 10 30 - -
Trme599574g00001 82 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme599574g00001 Trme-Chr599574 1 245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme599574g00001 43 77 B3 DNA Binding Superfamily AT5G60450 71.429 5.05e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme599574g00001 K14486 - gmx:100789906 116.701