Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59643g00001 ATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTAGAAGGAGGGCACATAGTTCGATCCACCGGTAAAAAAGATCGACACAGCAAGGTTTACACGTCAAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACACACAGCAATCGAATTCTACGATGTTCAAGATCGCCTTGGCTACGACAGACCAAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCTTCCATTGACAAACTCGCCAAGCTTCCTCCATGGCATCCGATCGGCGAAAATCAAACACTAAAACCTCAAGAAGAGCAGAATGCATCTGCAGACACAACTGGTATGATTATTGGAGAATCATCAGAATCTAATGGTTACAGTTTTCATCTCTTAAGTCAATTAAGTGAGAATCAAGGTAACAATTCATCTTTCATTTCAGCACATGATGTTGAAACTAATCCTATACCTTTCTTTCCAACTGCCTCTTCTACTTCTTC 485 0.4289 MRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKPQEEQNASADTTGMIIGESSESNGYSFHLLSQLSENQGNNSSFISAHDVETNPIPFFPTASSTSS 162
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme59643g00001 162 MobiDBLite consensus disorder prediction 1 37 - -
Trme59643g00001 162 MobiDBLite consensus disorder prediction 85 106 - -
Trme59643g00001 162 ProSiteProfiles TCP domain profile. 23 81 IPR017887 -
Trme59643g00001 162 MobiDBLite consensus disorder prediction 18 37 - -
Trme59643g00001 162 Pfam TCP family transcription factor 21 120 IPR017887 -
Trme59643g00001 162 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 144 IPR005333 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme59643g00001 Trme-Chr59643 402 886 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59643g00001 7 89 TCP Transcription Factor Family AT3G15030 86.747 4.40e-49 161
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme59643g00001 TCP 5e-32 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59643g00001 - - cave:132180998 215.312