Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme59643g00001 | ATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTAGAAGGAGGGCACATAGTTCGATCCACCGGTAAAAAAGATCGACACAGCAAGGTTTACACGTCAAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACACACAGCAATCGAATTCTACGATGTTCAAGATCGCCTTGGCTACGACAGACCAAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCTTCCATTGACAAACTCGCCAAGCTTCCTCCATGGCATCCGATCGGCGAAAATCAAACACTAAAACCTCAAGAAGAGCAGAATGCATCTGCAGACACAACTGGTATGATTATTGGAGAATCATCAGAATCTAATGGTTACAGTTTTCATCTCTTAAGTCAATTAAGTGAGAATCAAGGTAACAATTCATCTTTCATTTCAGCACATGATGTTGAAACTAATCCTATACCTTTCTTTCCAACTGCCTCTTCTACTTCTTC | 485 | 0.4289 | MRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKPQEEQNASADTTGMIIGESSESNGYSFHLLSQLSENQGNNSSFISAHDVETNPIPFFPTASSTSS | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme59643g00001 | 162 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Trme59643g00001 | 162 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - | |
Trme59643g00001 | 162 | ProSiteProfiles | TCP domain profile. | 23 | 81 | IPR017887 | - | |
Trme59643g00001 | 162 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
Trme59643g00001 | 162 | Pfam | TCP family transcription factor | 21 | 120 | IPR017887 | - | |
Trme59643g00001 | 162 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 18 | 144 | IPR005333 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme59643g00001 | Trme-Chr59643 | 402 | 886 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme59643g00001 | 7 | 89 | TCP Transcription Factor Family | AT3G15030 | 86.747 | 4.40e-49 | 161 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Trme59643g00001 | TCP | 5e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme59643g00001 | - | - | cave:132180998 | 215.312 |