Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme595805g00001 TGGACCGGTACGCCTAATGACGAAACTATTGTTCCAAAAGGGCAAAAACTCTCGCCATATAACATTATATCCGGAACTTCCATGTCATGCCCTCATGTTTCAGGCCTTGCAGCCAGCATTAAATCTAGGAATCCAACTTGGAGTCCGTCTGCAATCAAATCAGCTATCATGACCTCTGGTTAG 183 0.4481 WTGTPNDETIVPKGQKLSPYNIISGTSMSCPHVSGLAASIKSRNPTWSPSAIKSAIMTSG 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme595805g00001 60 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 59 IPR045051 -
Trme595805g00001 60 Pfam Subtilase family 18 59 IPR000209 GO:0006508|GO:0008236
Trme595805g00001 60 Gene3D Peptidase S8/S53 domain 13 59 IPR036852 GO:0004252|GO:0006508
Trme595805g00001 60 ProSiteProfiles Serine proteases, subtilase domain profile. 1 60 - -
Trme595805g00001 60 ProSitePatterns Serine proteases, subtilase family, serine active site. 25 35 IPR023828 -
Trme595805g00001 60 SUPERFAMILY Subtilisin-like 14 59 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme595805g00001 Trme-Chr595805 56 238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme595805g00001 7 59 Subtilisin-like Serine Gene Family AT1G20150 62.264 9.72e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme595805g00001 K25898 - tpra:123898882 97.8265