Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59539g00001 ATGGGTTTTCGCTTACCTGGTATTGGACGATCATCATCTAGCAAACAAGTGGAGGTGCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAGTATNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCAAGCTGAAGAGGAATTCGGTTACTGTCATCCAATGGGTGGTCTTACAATTCCCTGCAAGGAAGATGTCTTCTTACATACAGTTTCTTGCTTGAACAACTTGTAA 261 0.3563 MGFRLPGIGRSSSSKQVEVPKGYLAVYVGEKMKRFLIPVXXXXXXXXXXXXXQAEEEFGYCHPMGGLTIPCKEDVFLHTVSCLNNL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59539g00001 86 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Trme59539g00001 86 Coils Coil 37 39 - -
Trme59539g00001 86 Coils Coil 53 57 - -
Trme59539g00001 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59539g00001 Trme-Chr59539 438 698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59539g00001 18 85 Calmodulin-binding Proteins AT3G43120 44.118 5.31e-15 63.9