Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme594391g00001 ATGGAGTTGGAGAATTTGATTCGCAGAGATCCAGCTAAGGCGGCTGTTCCGGGTGGTGGACTTCACCCGATTACCCGATATGTGATGAACTATCTCCGTGCC 102 0.5196 MELENLIRRDPAKAAVPGGGLHPITRYVMNYLRA 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme594391g00001 34 Gene3D Exocyst complex component Exo70 1 34 - -
Trme594391g00001 34 Pfam Exo70 exocyst complex subunit 1 33 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme594391g00001 34 SUPERFAMILY Cullin repeat-like 1 33 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme594391g00001 Trme-Chr594391 1 102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme594391g00001 1 34 EXO70 exocyst subunit family AT5G58430 100.000 5.05e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme594391g00001 K07195 - cit:102617903 72.7886