Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme591654g00001 ATGGTGGGTGACAACAGAGGGTACATTGTCTCTCACACCGCCTCTACCAGCAACAACAACAACAACAACAATTTGATGATGCAAACACCATCATCGACACAATTGTCCATCCGTTGGTATATCAGTCTTCCTCAAGAGCAAAGGGAGGAACTTATCACAACCTCCTTCCGAAGGCCTAGAGGTAGACCCGTCGGATCTAAGAACAAGCCTAAACCAT 217 0.4654 MVGDNRGYIVSHTASTSNNNNNNNLMMQTPSSTQLSIRWYISLPQEQREELITTSFRRPRGRPVGSKNKPKP 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme591654g00001 72 MobiDBLite consensus disorder prediction 9 28 - -
Trme591654g00001 72 MobiDBLite consensus disorder prediction 51 72 - -
Trme591654g00001 72 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme591654g00001 Trme-Chr591654 1 217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme591654g00001 45 72 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 64.286 3.61e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme591654g00001 - - tpra:123922662 87.0409