Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59153g00001 ATGTCACCGTCCGCCGGAATCCACATCCCTCTTTTGCCTGGATCAAAATCAACGGCGGAGCATGGTACCATTCCCGGCGCCGTATTCAATGTCGCTACAAGCATAATTGGATCTGGAATCATGTCAATTCCAGCGATTCTAAAAGTTCTCGGTGTGTTTCCTTCTTTCGCATTGATTCTGATCGTGGCGGTGCTTGCCGAAGTTTCCGTAGATTTTCTGATGCGTTTTACGGATGCCGGTGCAAAAACAACGTATGCCGGTGTCATGAAGGAGGCTTTTGGATCGGTTGGAGCATTGACCACTAAAGTTTTTGTCATAATCAATAACTTTGGGGGATTAATTCTCTTACTTATTATTATAG 361 0.4488 MSPSAGIHIPLLPGSKSTAEHGTIPGAVFNVATSIIGSGIMSIPAILKVLGVFPSFALILIVAVLAEVSVDFLMRFTDAGAKTTYAGVMKEAFGSVGALTTKVFVIINNFGGLILLLIII 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59153g00001 120 Pfam Transmembrane amino acid transporter protein 22 120 IPR013057 -
Trme59153g00001 120 PANTHER AMINO ACID TRANSPORTER 16 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59153g00001 Trme-Chr59153 27 387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59153g00001 1 120 Amino Acid or Auxin Permease AAAP Family AT3G56200 49.593 2.37e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59153g00001 - - lja:Lj6g3v0466600.1 165.236