Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59117g00001 AGGGTGCAACCATTTGATAAAAGATACCAGTATCTCTTGTTTGCAGCTGAACCTTATGAAACAATTTCTTTCAAGGTACCAAGCACAGAGATTGACAAATCCACTCCGAAGTTTTTCTCGCATTGGGACCCAGATTCAAAGATGTTCACAGTAAGTACATTTACTCCTCTTTATTTTCTGTGA 183 0.3825 RVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTVSTFTPLYFL 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59117g00001 60 Gene3D - 2 56 - -
Trme59117g00001 60 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 52 - -
Trme59117g00001 60 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 4 49 IPR031781 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59117g00001 1 54 C2H2 Transcription Factor Family AT2G32600 81.481 2.28e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59117g00001 K12826 - ncol:116256998 109.383