Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59070g00001 TTGCAGCTTGAGAATGTACTTTTGGATGCCAAAGGGAACATAAAGATAACTGATTTTAACCTCAGTGCTTTGCCCCAACATTGCAGGGCAGATGGGTTGCTGCATACAACTTGNNNNNNNNNNAATTATGTTGCTCCTGAGATTCTTGCCAATAGAGGCTATGACGGTGCAAAATCCGATATTTGGTCATGTGGTGTTATCTTATATGTAATTCTAACAGGATACCTTCCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTTCAAAGGAGAAGTTCAGATACCAAGATGGTTGTCACCTGGTGCTCAAAACATAATAAAGAGAATTCTTGATCCCAATCCTAAAACCCGAATAACAATGTCTATGATCAAAGAAGATGAATGGTTTAAGCAGGGTTATAATCCTGCAAATCTAGACGATGAGGAAGAGGATGTTTACATTGATGATGAAGCCTTTTCCATCCAAGAAGTG 480 0.375 MQLENVLLDAKGNIKITDFNLSALPQHCRADGLLHTTXXXXNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGEVQIPRWLSPGAQNIIKRILDPNPKTRITMSMIKEDEWFKQGYNPANLDDEEEDVYIDDEAFSIQEV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59070g00001 160 SUPERFAMILY Protein kinase-like (PK-like) 3 141 IPR011009 -
Trme59070g00001 160 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 140 - -
Trme59070g00001 160 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Trme59070g00001 160 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme59070g00001 160 SMART serkin_6 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme59070g00001 160 Pfam Protein kinase domain 3 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59070g00001 Trme-Chr59070 94 889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59070g00001 1 160 CBL-interacting serine-threonine protein kinases AT3G17510 75.155 2.98e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme59070g00001 Pkinase 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59070g00001 K07198 - gmx:100815660 281.182