Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme590683g00001 ATGAAAGAACTCAACACTTCGGAGTTTGAGCAATGGCATGCAGCCTATGAAGCCGCAAGCACTGCGGTATTCGGTAGGGCTGCAATGCTCAAAAAGATTTCAAACAATGTAGAAAACAATGTTTGCATTCTAGGAGCTTCTGCTATTGAAGATAAACTTCAACAAGGCATGCCGGAAGCTATTGAGTCTCTAAGAGCAGCAGGGATTAAAGTTTGGGTTTTGACTGGCGACA 232 0.4353 MKELNTSEFEQWHAAYEAASTAVFGRAAMLKKISNNVENNVCILGASAIEDKLQQGMPEAIESLRAAGIKVWVLTGD 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme590683g00001 77 SUPERFAMILY HAD-like 11 77 IPR036412 -
Trme590683g00001 77 Gene3D - 5 77 IPR023214 -
Trme590683g00001 77 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme590683g00001 Trme-Chr590683 35 266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme590683g00001 1 77 Primary Pumps ATPases AT5G04930 71.429 1.28e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme590683g00001 K14802 - gmx:100791888 130.183