Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59062g00001 TCGTTAGCTAGACCTGTGACCAAAGAAAAACACGAGGAGACATCAAGAGTGGTGTTTGATGAGGTTGATGACGAGAAATTCGACGGAAAAAGCAATTTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAATTTTGGAAGAAATGATAAGGGAAGAAGAGAGGAAAAAAGAAAAAATTAATAGAAAAGATTATTGGTTGCATGAGGGAATTGTTGTCAAGGTTATGAGCAAAGCCTTGGAAGAGAAAGGGTACTACAAGCAAAAGGGTGTTGTGAGAAAAGTGATTGGCAAGTATATAGGGGAAATAGAAATGCTAGAAAGCAAGCATGTGCTTAGAGTTGATCAGGAAGAGCTTGAAACTGTGATTCCACAGATAGAGAAAGGTGCTTATGATGGTAGGGTGCTTAAAGCTGTGGAATATGAGGACATTTGTAAAGTAGCCTAG 444 0.3896 SLARPVTKEKHEETSRVVFDEVDDEKFDGKSNLKRKESGGGKSILEEMIREEERKKEKINRKDYWLHEGIVVKVMSKALEEKGYYKQKGVVRKVIGKYIGEIEMLESKHVLRVDQEELETVIPQIEKGAYDGRVLKAVEYEDICKVA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59062g00001 147 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 9 125 IPR037321 -
Trme59062g00001 147 FunFam DNA/RNA-binding protein kin17-like 69 122 - -
Trme59062g00001 147 Coils Coil 42 62 - -
Trme59062g00001 147 Gene3D - 69 122 - -
Trme59062g00001 147 Pfam KN17 SH3-like C-terminal domain 61 114 IPR041330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59062g00001 Trme-Chr59062 2 541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59062g00001 6 147 C2H2 Transcription Factor Family AT1G55460 50.276 3.43e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59062g00001 K13102 - gmx:100785931 211.46