Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme590212g00001 ACAATCTGCTTCAGGTATGATCCTTCAACTGGTATTTATGGAATGGATTTCTTTGTTGTTCTGGAGCGCCCTGGCTATCGTGTGGGTCGTCGCCGCAGATGCAAGGCCCGCGTTGGAATTCAACACCGTGTCACAAAGGATGATGCTATGAAGTGGTTCCAGGTCAAATATGAGGGAGTAATCCTTAATAAATCCCAGGCAATTGTTTAG 210 0.4619 TICFRYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAIV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme590212g00001 69 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 5 64 IPR002132 GO:0003735|GO:0005840|GO:0006412
Trme590212g00001 69 SUPERFAMILY RL5-like 5 61 IPR022803 -
Trme590212g00001 69 Gene3D - 2 65 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme590212g00001 Trme-Chr590212 1 210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme590212g00001 2 69 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 88.235 3.07e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme590212g00001 K02868 - fve:101302044 117.857