Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme59004g00001 ATGGAAGCCAGATTTGATGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCGGAAGGACCACAAGGATGGCTGAATAGTGGCCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTGGATTTTGGCGGTTTGACAGATACTATCAATGAAGTAATCGGAGAATCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGAATTGGTGCATTAGCTTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCAGCTGCACTTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAG 348 0.431 MEARFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWLNSGLPWIEPKKALSLDFGGLTDTINEVIGESDGLAVTLGIAAATGIGALAFSEVETILQLVGSAALVQFASKKLLFAE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme59004g00001 116 Gene3D - 3 56 IPR036873 -
Trme59004g00001 116 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 4 116 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme59004g00001 Trme-Chr59004 58 859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme59004g00001 4 116 Sulfurtransferasese or Rhodanese AT4G01050 76.316 6.16e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme59004g00001 K17525 - cave:132187644 169.859