Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58991g00001 CAATCATCGGTTGTTCCGTTTACGAAGCAGCAGAAGGTGAGTTCTACTATTGCCGGAGACGACGCAAGCAACCAGCTTCAGCAGAGTATATTTGATCAACTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTGAAAGGGCTTCTTTCTATGTGAAGGAAGCCTTACAGTTAATGCTTCATTCGAACGGTAACAATCTCAATGCTTTTTCACCGATTAGTTTCATATTCAAAATCGGAGCTTACAAGTCTTTTTCCGAGATATCGCCTGTTCTTCAGTTCGCCAACTTTACTTGTAATCAAGTCCTAATTGAAGCCTTGGAAAGGTTCGACCGAATTCACATTGTTGATTTCGATATAGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAACGGTATACCTTCACTTAAGATTACTGCTGTTGTATCGCCCTCGTCTTGCAACGAGATTGAGCTCAATTTCACCCAASAMAATCTGAGTCAGTATGCRAAAGACCTCAACATGCCGTTTGAGTTCAGTATTTTGAACATGGAATTCTTGAACTCTCCSTCRTTTCCTCAACCAGCTCATTTCTTTGATAGTAACGAGGCGATTGGTGTGAACTTCCCTGTTTCAAGTTTTATAGGTTATCCATCATCTTTCCCTTTGGCCCTTCACTTTGTCAAGCAGTTAAGGCCCAAAGTGGTTGTCACTTTGGATAAAAACTGCGACCGACTCGATGTTCCGCTTCCGACCAACGTTGTTCATGTTCTTCAATGTTACTCATCCTTGCTTGAATCACTTGATGCT 876 0.4212 QSSVVPFTKQQKVSSTIAGDDASNQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNNLNAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQVLIEALERFDRIHIVDFDIGFGVQWSSFMQELVLRGNGIPSLKITAVVSPSSCNEIELNFTQXNLSQYAKDLNMPFEFSILNMEFLNSPSFPQPAHFFDSNEAIGVNFPVSSFIGYPSSFPLALHFVKQLRPKVVVTLDKNCDRLDVPLPTNVVHVLQCYSSLLESLDA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58991g00001 292 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 291 IPR005202 -
Trme58991g00001 292 Pfam GRAS domain family 32 292 IPR005202 -
Trme58991g00001 292 ProSiteProfiles GRAS family profile. 21 292 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58991g00001 Trme-Chr58991 16 891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58991g00001 29 292 GRAS Transcription Factor Family AT4G00150 51.504 4.31e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme58991g00001 GRAS 3.1e-60 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58991g00001 - - psat:127101146 498.049