Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5887g00001 ATGTTGTGGGTTGACAAGTATCGTCCCAAAACCCTTGACAATGTTATGGTTCACAATGACATCGCTCAAAATCTCAAGAAATTGGTTACTGAACATGATTGCCCTCATTTGCTGTTCTATGGCCCATCTGGCGCTGGCAAGAAGACACTAATCATGGCTCTTCTCCGCCAAATGTTTGGACCGGGTGCTGAAAAG 195 0.4513 MLWVDKYRPKTLDNVMVHNDIAQNLKKLVTEHDCPHLLFYGPSGAGKKTLIMALLRQMFGPGAEK 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5887g00001 65 Gene3D - 1 65 IPR027417 -
Trme5887g00001 65 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 59 - -
Trme5887g00001 65 Pfam Rad17 P-loop domain 2 56 - -
Trme5887g00001 65 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 61 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5887g00001 Trme-Chr5887 1691 1991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5887g00001 1 65 Core DNA Replication Machinery Family AT5G27740 80.000 2.43e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5887g00001 K10756 - gmx:100818329 129.028