Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58811g00001 ATGGTTGTGGGTGGATCAGACACATCCTCCAACACAATTGAGTTTGCACTGGCAGAAATGATGAACAACCCAGAAGTAATGAAGAAAGTTCAAGAGGAGTTAGAAGCTGTGGTTGGAAAAGATAACTCGGTAGAAGAGTCTCACATTCATAAGCTACCCTACTTACATGCAGTGATGAAAGAAACACTTCGTTTGCACCCAGCACTTCCACTTTTAGTCCCTCACTGTCCAAGTGAAACCACCAATGTTGGAGGCTACACAATTCCAAAGGGATCTCGTGTGTTTGTGAACGTTTGGGCTATTCATAGAGACCCTTCCATTTGGGAGAAACCACTAGAATTTGATCCTACAAGGTTCTTGGATGGTAAATGGGATTACAGTGGAAATGACTTCAATTATTTCCCCTTTGGTTCTGGAAGAAGGATTTGTGCTGGAATAGCAATGGCTGAGAGGACTGTTTTGTACTTTATAGCTACCCTTGTGCACTTGTTTGACTGGACTATACCACAAGGAGAAAAGTTGGAGGTATCAGAGAAATTTGGTATTGTTCTAAAAAAGAAGACACNNNNNNTNNNNNNNNNNACGCCGCGACTTTCCACTCCAGAGCTTTATAAATAG 618 0.4094 MVVGGSDTSSNTIEFALAEMMNNPEVMKKVQEELEAVVGKDNSVEESHIHKLPYLHAVMKETLRLHPALPLLVPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWEKPLEFDPTRFLDGKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFIATLVHLFDWTIPQGEKLEVSEKFGIVLKKKTXXXXXXTPRLSTPELYK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58811g00001 205 Gene3D Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS P450 superfamily signature 134 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS E-class P450 group I signature 133 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS E-class P450 group I signature 143 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 Pfam Cytochrome P450 1 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58811g00001 205 PANTHER OS08G0547900 PROTEIN 1 205 - -
Trme58811g00001 205 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 136 145 IPR017972 GO:0005506|GO:0016705
Trme58811g00001 205 FunFam Predicted protein 2 191 - -
Trme58811g00001 205 SUPERFAMILY Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58811g00001 Trme-Chr58811 208 825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58811g00001 1 204 Cytochrome P450 AT4G12330 66.176 4.55e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58811g00001 - - vvo:131637263 367.081