Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58770g00001 AAAGGTCAAACTGAAGCCAAACCATCTAATGTGATTACCTATCCAAATGGGTTGATTATAGAGGACATATCTATGGGTAAACCAGATGGCAAAAGAGCTGATCTTGGAAAAAAGGTCAGTGTTAAATATATTGGCAAGCTAAAAAAAGATGGGAAAATATTTGATTCATGTGTCGGAAAAGCACCCTTTAAGTTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGATGTTGGCATCAAAGGGATGAGGGTTGGGGACAAAAGAAGACTTACAATTCCACCATCTATGGGATACGGAGACAAACGCGCTGGGGTTATACCACAAAATTCATGGCTTGTATTTGATGTTGAGTTGGTTGGCGTTGGTAACTAA 375 0.408 KGQTEAKPSNVITYPNGLIIEDISMGKPDGKRADLGKKVSVKYIGKLKKDGKIFDSCVGKAPFKFRLGVGQVIKGWDVGIKGMRVGDKRRLTIPPSMGYGDKRAGVIPQNSWLVFDVELVGVGN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58770g00001 124 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 31 120 IPR001179 GO:0003755
Trme58770g00001 124 Gene3D - 1 124 IPR046357 GO:0003755
Trme58770g00001 124 FunFam Peptidyl-prolyl cis-trans isomerase 10 124 - -
Trme58770g00001 124 SUPERFAMILY FKBP-like 5 122 - -
Trme58770g00001 124 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 3 122 - -
Trme58770g00001 124 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 36 123 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58770g00001 Trme-Chr58770 1 764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58770g00001 36 120 Calmodulin-binding Proteins AT3G25230 51.724 3.49e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58770g00001 K14826 - gmx:100789099 206.068